Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903294.1_cds_XP_016453290.1_47429
CDS Infomation

[gene=LOC107777704] [db_xref=GeneID:107777704] [protein=ATPase family AAA domain-containing protein 3-like] [protein_id=XP_016453290.1] [location=complement(join(23953..24463,25197..25345,25709..26042,26784..26874,27530..27839,27920..28030,28841..28936,29211..29510))] [gbkey=CDS]
Sequence

ATGGGAAAAACATATGCAGCAGGGCTATTTGCAGCCCTAGCTTCTGCTAAGTTTGGTACA
GAAACTGCTTATGCCGACGGTGGTGGTGGTGGTTTCAGCTTCTCTCCGTTTTCCACCTCT
TCTAATAAGGTACCGAGTGCTCCTGCTGATGTTCCTCAGCCGGCAGCTGCAACTCCTGAG
CCTCCTCCTAAGGTTCGAAATGATAATCCGAGGACTACTTCAGCTGGTTTTGATCCTGAG
GCTTTGGAGAGAGGTGCTAAGGCTTTGAGAGAGATTAATAGTTCCAAAAGTGCCAAACAG
GTTTTTGAAGTGATTAAAAAGCAAGAAGATACGAGACAGGTAGAGTTAACTGCAAAAATG
CAAGAGTTTAAAGCACTGCAAGCTCAAGCTGAGACGGAGAGACAAAGGGTTATATACGAC
GAACAAAAAAAATTAGCTCAGCAACAGGCACAAATCAAGTCACAGATGGCTCGATATGAA
GATGAATTAGCAAGGAAAAGGATGCAGGCAGAAAATGAGCACCATAGAGCTAGAAATCAG
GAGTTGGTAAAAATGCAAGAGGATTCAGCTCTGAGACAAGAGGCAGCTAGACGAGCAACA
GAAGAACAAATCCAAGCGCAGCGCCGCCAGACAGAGAGAGAAAAAGCAGAGATAGAACGT
GAAACTATTAGAGTGAGAGCTATGGCAGAAGCAGAGGGGAGAGCACATGAAGCAAAGCTG
GCTGAGGATGTTAACAGGAGAATACTAGTAGACCGTGCAAATGCTGAACGGGAGAAATGG
GTCGCTGCTATTAACACAACTTTTGATCATATTGGAGGTGGTTTCCGTGCAATACTAACG
GATCAAAATAAGCTTGTTGTGGCTGTTGGTGGCGTGACTGCTCTTGCAGCTGGAATATAT
ACAACAAGAGAAGGTGCAAGAGTTGTCTGGAGTTATGTGGACAGAATATTGGGACAGCCA
TCATTGATCAGAGAGTCATCTAGGGGTAAATATCCTTGGTCAGGCTTCTTCTCACGAGCC
ATGAGCACTCTCTCGAAGGGTGCTAATGGAGGTTCTGCAACCAAGTCTGAGAAAGGGTTC
GGGGATGTCATTCTACATCCATCTCTTGAAAAAAGGATTCAGCAATTAGCCAATGCTACT
GCTAATACCAAATCCCATCAAGCTCCATTTCGCAACATGCTCTTTTATGGTCCTCCAGGA
ACAGGGAAGACAATGGTTGCTAGAGAGCTTGCTCGCAGATCTGGACTTGACTATGCATTG
ATGACGGGTGGTGATGTTGCGCCACTGGGATCGCAGGCTGTCACTAAAATACATCAGTTA
TTTGACTGGTCCAAAAAATCCAGAAAGGGTCTATTACTTTTTATTGACGAAGCAGATGCA
TTTTTGTGCGAGCGAAACAAAACCTATATGAGTGAAGCTCAGAGGAGTGCCCTCAATGCC
CTCCTTTTCCGCACCGGTGATCAGTCAAAAGATATAGTACTTGCTTTAGCTACAAATCGC
CCTGGTGATCTTGATTCAGCTGTTGCAGACCGTATTGATGAAGTCATCGAATTCCCTTTG
CCTGGGGAAGGTGAGCGCTTCAAGCTGATCAAACTGTATCTGGAAAGATATATAGCTCAA
GCTGGGGAAAGGAAACCTGGTTTCTTTTCAAGCTTATTCAAGAAGCAGCAGCAGAAAATA
GAGATAAAAGGGTTGACGGATGATATTCTTAGAGAAGCTGCTGCCAGGACGGAGGGATTT
TCAGGCAGAGAGATTGCAAAACTGATGGCTAGTGTTCAAGCTGCTGTATATGGAAGTGAG
GACTGTGTATTAGACCCTAACTTATTTCATGAAGTGGTAGATTATAAAGTTGCTGAACAT
CAGCAGAGGAGGAAATTAGCAGCAGCTGAGGGTGACAAGTGA

Peptide Sequence

PEP ID

XP_016453290.1
PEP Infomation

PREDICTED: ATPase family AAA domain-containing protein 3-like [Nicotiana tabacum]
Sequence

MGKTYAAGLFAALASAKFGTETAYADGGGGGFSFSPFSTSSNKVPSAPADVPQPAAATPE
PPPKVRNDNPRTTSAGFDPEALERGAKALREINSSKSAKQVFEVIKKQEDTRQVELTAKM
QEFKALQAQAETERQRVIYDEQKKLAQQQAQIKSQMARYEDELARKRMQAENEHHRARNQ
ELVKMQEDSALRQEAARRATEEQIQAQRRQTEREKAEIERETIRVRAMAEAEGRAHEAKL
AEDVNRRILVDRANAEREKWVAAINTTFDHIGGGFRAILTDQNKLVVAVGGVTALAAGIY
TTREGARVVWSYVDRILGQPSLIRESSRGKYPWSGFFSRAMSTLSKGANGGSATKSEKGF
GDVILHPSLEKRIQQLANATANTKSHQAPFRNMLFYGPPGTGKTMVARELARRSGLDYAL
MTGGDVAPLGSQAVTKIHQLFDWSKKSRKGLLLFIDEADAFLCERNKTYMSEAQRSALNA
LLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVIEFPLPGEGERFKLIKLYLERYIAQ
AGERKPGFFSSLFKKQQQKIEIKGLTDDILREAAARTEGFSGREIAKLMASVQAAVYGSE
DCVLDPNLFHEVVDYKVAEHQQRRKLAAAEGDK

Transcript Sequence

Gene sequence data has not been registered.